Dr. Joshua V. Peñalba

Curriculum vitae

Education & professional appointments

2021–now
Illustration of the TV Tower, Berlin

Museum für Naturkunde, Berlin

Research scientist · Center for Integrative Biodiversity Discovery

2017–2020
Illustration of the Olympic Tower, Munich

Ludwig-Maximilians-Universität München

Postdoctoral researcher · Division of Evolutionary Biology

PI: Prof. Jochen Wolf

2013–2017
Illustration of Telstra Tower, Canberra

Australian National University & CSIRO

PhD candidate · Research School of Biology

Advisors: Prof. Craig Moritz & Dr. Leo Joseph

2008–2013
Illustration of Sather Tower, Berkeley

University of California, Berkeley

B.A. Integrative Biology (Hons)

Advisor: Prof. Rauri Bowie

Volunteer & other appointments

2016–2017

Moritz Lab Manager (part-time), Australian National University

Standard molecular lab maintenance — inductions, supply stocking, expenditure management.

2011–2013

Assistant Lab Manager, UC Berkeley — Evolutionary Genetics Lab

Lab maintenance in the absence of the resident manager; training of other researchers.

2011–2013

Independent Contractor: Evolutionary Genetics, UC Berkeley

Collected genetic and genomic data for foreign researchers.

2010–2013

Curatorial Assistant, UC Berkeley — Museum of Vertebrate Zoology

Organized specimens, updated databases, installed specimens (ornithology, herpetology, mammalogy).

2009–2013

Field Assistant, UC Berkeley — Museum of Vertebrate Zoology

Assisted curators and graduate students on field trips for collecting and ecological studies.

2009–2013

Lab Technician, UC Berkeley (Advisor: Dr. Rauri Bowie)

Standard molecular lab techniques for Sanger sequencing and NGS.

2008–2013

Preparation Lab Assistant, UC Berkeley — Museum of Vertebrate Zoology

Prepared ~350 specimens (skeletons, study skins, alcohol) for the collection.

Teaching & training

2014–2015

ANU — Demonstrator, Biol1008: Human Biology (2 semesters)

2014

ANU — Demonstrator, Biol3157: Bioinformatics and Functional Genomics

2011

UC Berkeley — Undergraduate Student Instructor, IB173: Ornithology

2010–2013

UC Berkeley — Undergraduate Student Instructor, Advanced Bird Skinning Seminar (4 semesters)

2009–2010

UC Berkeley — Undergraduate Student Instructor, Preparation Lab Seminar (2 semesters)

2009–2013

UC Berkeley — Lab Technician, Evolutionary Genetics Lab Training (~15 students)

Invited talks

2026

Technical University Munich, Germany

2026

Universidade Federal do Rio de Janeiro

2023

Durham University, United Kingdom

2022

Integration of Speciation Research (IoS) [video]

2022

Potsdam University, Germany

2021

Museum of Vertebrate Zoology Seminar, UC Berkeley, California, US [video]

2020

Louisiana State University — Systematics, Ecology, and Evolution Seminar Series

2019

Museum für Naturkunde, Berlin

Conference presentations

2025

Deutsche Zoologische Gemeinschaft (Berlin, Germany)

Assessing the adaptive potential of German pollinators through comparative population genomics. Poster.

2023

Gordon Research Conference - Speciation (Tuscany, Italy)

Divergence and gene flow through the speciation continuum: comparative speciation genomics using an avian suture zone. Poster.

2023

Society for Molecular Biology and Evolution (Ferrara, Italy)

Rapid transition during speciation revealed from comparative study across an avian suture zone. Poster.

2022

BeGenDiv Meeting (Berlin, Germany)

Genome divergence and gene flow through the speciation continuum: insights from an avian suture zone. Oral Presentation.

2022

European Reference Genome Atlas Meeting (Cologne, Germany)

Automated, high-throughput species identification & discovery in small insects: incorporating de novo genome sequencing into the pipeline. Poster.

2022

Dresden Meeting on Insect Phylogeny (Dresden, Germany)

Comparative analysis of nondestructive DNA extraction protocols for museum insect specimens. Oral Presentation.

2019

SMBE Satellite Meeting: Speciation (Tjärno, Sweden)

The effect of inversions on individual male recombination rate. Oral Presentation.

2018

Joint Congress on Evolutionary Biology (Montpellier, France)

Genome divergence and gene flow through the speciation continuum: insights from suture zones of Australian birds. Oral, Hamilton Award Symposium.

2017

Centre for Biodiversity Analysis — Genomics and Collections (Canberra, Australia)

De novo whole genome sequencing and assembly of the superb fairywren. Poster. Genomic introgression across an Australian bird suture zone.

2017

Gordon Research Conference — Speciation (Tuscany, Italy)

Divergence-with-gene-flow in birds: genome differentiation in allopatry vs. parapatry through the speciation continuum. Poster.

2016

Society for Molecular Biology and Evolution (Gold Coast, Australia)

Genomic divergence in allopatry vs. parapatry through the speciation process. Poster.

2015

Australasian Ornithological Council (Adelaide, Australia)

Divergence in an avian suture zone. Oral Presentation.

2014

International Biogeography Conference (Sydney, Australia)

Sequence Capture using PCR-generated Probes (SCPP). Poster.

2013

Evolution (Snowbird, Utah, USA)

Sequence Capture using PCR-generated Probes (SCPP). Poster.

Awards

2017

Vice Chancellor's HDR Travel Grant, ANU — $1500 AUD

2016

Registration Reimbursement Award, SMBE — $425 AUD

2016

Spencer Smith-White Travel Grant, Genetics Society of Australasia — $500 AUD

2015

Stuart Leslie Bird Research Award, BirdLife Australia — $5000 AUD

2015–2017

The Hermon Slade Foundation — $58,800 AUD

2015

Joyce W. Vickery Wildlife Fund, Linnean Society of NSW — $800 AUD

2013–2016

University Research Scholarship (International), ANU

$31,600 AUD/yr tuition, $24,653 AUD/yr stipend

2013

Departmental Citation Award, Integrative Biology, UC Berkeley

2012

Summer Undergraduate Research Fellowship, UC Berkeley — $4000 USD

2011–2012

Biodiversity Award, Museum of Vertebrate Zoology, UC Berkeley — $2500 USD (×2)

2010

Biology Fellows Program, UC Berkeley — $2500 USD

Skills

Natural history collections

  • Museum specimen preparation (skeletons, bird skins, alcohol)
  • Specimen cataloging
  • Curatorial assistantship

Molecular methods

  • DNA extraction (tissue, blood, historic)
  • Sanger sequencing
  • NGS gDNA library prep
  • NGS target enrichment
  • NGS ddRADseq

Field methods

  • Small mammal trapping
  • Bird mist-netting
  • Playback experimentation
  • Lizard noosing & capture

Computational methods

  • R & Python
  • NGS pipeline generation and management
  • De novo whole genome assembly
  • Sequence capture & ddRAD data processing
  • Population genetic analyses

Other

  • Adobe Illustrator / graphic design
  • Professional social media outreach